STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4298HD_domain domain-containing protein; Unnamed protein product; Similar to unknown protein and some similarities with cyanamide hydratase. (213 aa)    
Predicted Functional Partners:
plu4297
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to AraC family transcriptional regulator.
 
     0.797
plu2236
FAD_binding_3 domain-containing protein; Unnamed protein product; Some similarities with probable monooxygenase.
  
     0.592
plu3544
HTH araC/xylS-type domain-containing protein; Unnamed protein product; Similar to probable transcription regulator.
 
     0.582
plu1743
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to putative monooxygenase.
  
     0.581
plu3545
DJ-1_PfpI domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
     0.546
plu1866
Bac_luciferase domain-containing protein; Unnamed protein product; Highly similar to nitrilotriacetate monooxygenase component A.
  
     0.526
plu1322
FAD_binding_3 domain-containing protein; Unnamed protein product; Similar to 2.4-dihydroxybenzoate monooxygenase.
  
     0.508
plu4183
Unnamed protein product; Some similarities with the central region of cytochrome P450.
  
    0.464
plu0947
ABM domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.437
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.