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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4300HTH gntR-type domain-containing protein; Unnamed protein product; Similar to GntR-family transcriptional regulator. (256 aa)    
Predicted Functional Partners:
plu4305
Unnamed protein product; Similar to unknown protein.
 
     0.684
nadR
Transcriptional regulator NadR.
   
  
 0.649
plu0139
Uncharacterized protein; Truncated gene. Similar to the central region of unknown protein.
  
  
 0.562
ilvH
Acetolactate synthase isozyme III small subunit (AHAS-III) (acetohydroxy-acid synthase III small subunit) (ALS-III).
   
    0.527
pdhR
Pyruvate dehydrogenase complex repressor.
 
  
 0.468
pxpA
5-oxoprolinase subunit A; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
     0.421
uxuR
Uxu operon transcriptional regulator.
 
  
 0.415
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.