STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu4313Unnamed protein product; Similar to unknown protein. (227 aa)    
Predicted Functional Partners:
plu4314
Unnamed protein product; Some similarities with unknown protein.
 
  
 0.992
plu4312
Unnamed protein product; Similar to unknown protein.
 
     0.933
plu4311
Unnamed protein product; Similar to unknown protein.
 
     0.914
plu4310
Unnamed protein product; Some similarities with unknown protein.
 
     0.902
arcB
Aerobic respiration control sensor protein.
    
 
 0.900
pspC
Phage shock protein C.
 
 
 0.843
pspB
Phage shock protein B.
 
 
 0.824
plu4309
GSP_synth domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
     0.717
bvgS
Virulence sensor protein BvgS precursor.
    
 
 0.697
barA
Sensor protein BarA.
    
 
 0.671
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.