STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4367HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to putative transcriptional regulator. (98 aa)    
Predicted Functional Partners:
plu2099
Unnamed protein product; Similar to unknown protein.
 
 
   0.812
plu2537
Unnamed protein product; Similar to unknown protein.
 
 
   0.812
plu3981
Unnamed protein product; Similar to unknown protein.
 
 
   0.812
plu2098
HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to putative DNA-binding protein.
  
     0.644
plu4365
HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to bacteriophage protein.
 
     0.507
plu4368
VOC domain-containing protein; Unnamed protein product; Unknown protein.
       0.450
plu4366
Unnamed protein product; Some similarities with bacteriophage protein, putative truncated protein.
       0.400
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.