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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4368VOC domain-containing protein; Unnamed protein product; Unknown protein. (196 aa)    
Predicted Functional Partners:
plu4306
Unnamed protein product; Similar to biotin carboxylase.
  
 
 0.909
plu1104
VOC domain-containing protein; Unnamed protein product; Similar to lactoylglutathione lyase and related lyases.
    
 0.907
nuoC
NADH dehydrogenase I chain C/D (NADH-ubiquinone oxidoreductase chain 3/4) (NUO3/NUO4); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
  
 0.531
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.510
plu4369
Unnamed protein product; Similar to bacteriophage tail fiber assembly protein.
       0.473
plu4370
Unnamed protein product; Some similarities with the N-terminal region of unknown bacteriophage protein.
       0.473
nuoI
NADH dehydrogenase I chain I (NADH-ubiquinone oxidoreductase chain 9) (NUO9); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.466
plu3335
Uncharacterized protein; Truncated gene. Some similarities with tail fiber assembly protein from bacteriophage.
  
  
 0.466
sdhC
Succinate dehydrogenase cytochrome b-556 subunit.
   
  
 0.458
plu2552
Unnamed protein product; Similar to putative nitroreductase YdjA of Escherichia coli.
  
  
 0.450
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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