Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zurZinc uptake regulation protein (Zinc uptake regulator); Belongs to the Fur family. (170 aa)    
Predicted Functional Partners:
znuC
High affinity zinc uptake system ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.839
znuA
High affinity zinc uptake system precursor protein ZnuA.
  
  
 0.641
ahpC
Alkyl hydroperoxide reductase, small subunit (antioxidant).
  
  
 0.586
fur
Ferric uptake transcription regulator (ferric uptake regulator); Belongs to the Fur family.
 
   
 0.555
plu1781
CoA_binding domain-containing protein; Unnamed protein product; Highly similar to unknown protein YccU of Escherichia coli.
  
    0.526
rpoA
RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.523
copA
Copper-transporting P-type ATPase.
     
 0.503
plu4372
Unnamed protein product; Similar to unknown protein YnjI of Escherichia coli.
       0.497
yfeB
Iron transport system ATP-binding protein YfeB.
  
  
 0.492
nadR
Transcriptional regulator NadR.
  
    0.486
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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