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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dltAD-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL). (487 aa)    
Predicted Functional Partners:
dltC
D-alanine carrier protein DltC.
  
  0.964
plu1885
PKS_KS domain-containing protein; Unnamed protein product; Similar to polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   0.957
plu2408
AMP-binding domain-containing protein; Unnamed protein product; Some similarities with D-alanine-D-alanyl carrier protein ligase.
  
 
0.943
dltB
DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid; Belongs to the membrane-bound acyltransferase family.
 
  
 0.934
plu4189
Carrier domain-containing protein; Unnamed protein product; Hypothetical gene.
   
  0.933
plu3919
Carrier domain-containing protein; Unnamed protein product; Some similarities with polyketide synthase and peptide synthetase.
 
 0.905
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
0.904
ddl
D-alanine--D-alanine ligase B (D-alanylalanine synthetase) (D-Ala-D-Ala ligase); Cell wall formation.
     
 0.901
dadX
Alanine racemase, catabolic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
  0.900
alr
Alanine racemase, biosynthetic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
  0.900
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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