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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4430Uncharacterized protein; Truncated gene. Highly similar to the central region of transposase. (520 aa)    
Predicted Functional Partners:
plu4431
Unnamed protein product; Hypothetical gene.
       0.773
rfaZ
Lipopolysaccharide core biosynthesis protein RfaZ.
  
     0.730
plu0136
DUF4942 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.705
plu3462
Methyltransferase; Unnamed protein product; Similar to adenine-specific modification methylase homolog (Gp52); Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.624
plu3231
Unnamed protein product; Similar to putative membrane protein of Y. pestis.
 
  
 0.597
plu3247
Unnamed protein product; Similar to putative membrane protein of Y. pestis.
  
     0.593
plu3009
Unnamed protein product; Similar to phage tail fiber assembly protein.
  
     0.590
plu4203
ImpA_N domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
    0.590
plu3224
Unnamed protein product; Similar to unknown protein.
 
    0.582
plu3238
Unnamed protein product; Similar to putative membrane protein of Y. pestis.
  
     0.579
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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