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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecDIron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (318 aa)    
Predicted Functional Partners:
fecE
Iron(III) dicitrate transport ATP-binding protein FecE.
 
 0.982
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.929
fecB
Iron(III) dicitrate-binding periplasmic protein precursor FecB.
 
 
 0.917
fepC
Ferric enterobactin transport ATP-binding protein FepC.
 
 
 0.916
plu2634
Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Highly similar to hemin-binding protein.
 
 
 0.855
fecC
Iron(III) dicitrate transport system permease protein FecC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 
0.840
btuF
Vitamin B12 transport protein BtuF precursor; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
 
 0.833
fepB
Ferric enterobactin binding periplasmic protein precursor FepB.
 
 
 0.746
plu2851
ABC transporter domain-containing protein; Unnamed protein product; Similar to Hemin/Siderophore transport ATP-binding protein.
 
 
 0.739
plu2853
Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Some similarities with iron(III) ABC transporter, periplasmic iron-binding protein.
 
 
 0.659
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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