STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4451AAA_12 domain-containing protein; Unnamed protein product; Some weak similarities with DNA helicase related protein. (1104 aa)    
Predicted Functional Partners:
plu1799
Unnamed protein product; Similar to myo-inositol catabolism iolB of Bacillus subtilis.
   
    0.666
hsdM
Type I site-specific deoxyribonuclease HsdM; Truncated gene. Similar to the central region of integrase.
  
  
 0.480
plu4452
Unnamed protein product; Similar to ATP-dependent DNA helicase.
       0.479
plu4453
Unnamed protein product; Similar to a putative DNA processing protein.
       0.470
plu1158
Unnamed protein product; Similar to unknown protein STY4592 of Salmonella enterica subsp. enterica serovar Typhi.
 
  
 0.438
plu1088
Unnamed protein product; Similar to unknown protein.
  
     0.433
plu1087
Unnamed protein product; Similar to unknown protein. Hypothetical secreted protein.
  
     0.419
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.