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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4457AAA domain-containing protein; Truncated gene. Some similarities with the N-terminal region of unknown protein. (373 aa)    
Predicted Functional Partners:
plu4458
Peptidase_S8 domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
 
   0.946
glpK
Glycerol kinase (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK); Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.932
degQ
Protease precursor DegQ; Belongs to the peptidase S1C family.
    
 0.724
degS
Protease DegS; Truncated gene, similar to virulence-associated protein.
    
 0.724
plu4346
Unnamed protein product; Similar to unknown protein.
    
 0.724
plu0554
Unnamed protein product; Similar to ABC transporter, ATP-binding protein.
  
     0.622
plu3369
ANK_REP_REGION domain-containing protein; Unnamed protein product; Some similarities with phospholipase A accessory protein.
    
 0.615
plu3370
Unnamed protein product; Similar to phospholipase A.
    
 0.615
plu4145
Unnamed protein product; Some similarities with ABC-type transport protein (IM-ABC type).
  
 
  0.529
thiQ
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
  
     0.520
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.