STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu4486Unnamed protein product; Similar to amino acid ABC transporter (ATP-binding protein). (254 aa)    
Predicted Functional Partners:
plu4485
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (permease).
 0.990
plu4484
PBPb domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (Binding Protein); Belongs to the bacterial solute-binding protein 3 family.
 
 0.979
plu4487
PBPb domain-containing protein; Unnamed protein product; Similar to amino acid ABC transporter (amino acid-binding protein).
 
 0.979
gltK
Glutamate/aspartate transport system permease protein GltK.
 
 0.900
plu0220
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Highly similar to amino acid permease component of ABC transporter.
 
 0.898
plu0221
ABC transmembrane type-1 domain-containing protein; Unnamed protein product; Highly similar to amino acid permease component of ABC transporter.
 
 
 0.897
gltJ
Glutamate/aspartate transport system permease protein GltJ.
 
 
 0.874
artI
Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.809
artQ
Arginine transport system permease protein artQ.
 
   
 0.780
artM
Arginine transport system permease protein artM.
 
  
 0.779
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.