Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aceB | fumC | plu4396 | plu2359 | Malate synthase A (MSA). | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.928 |
aceB | gltA | plu4396 | plu1425 | Malate synthase A (MSA). | Citrate synthase; Belongs to the citrate synthase family. | 0.948 |
aceB | icd | plu4396 | plu2801 | Malate synthase A (MSA). | Isocitrate dehydrogenase [NADP]. | 0.588 |
aceB | maeA | plu4396 | plu1546 | Malate synthase A (MSA). | Malate dehydrogenase (oxaloacetate-decarboxylating); Belongs to the malic enzymes family. | 0.917 |
aceB | maeB | plu4396 | plu2719 | Malate synthase A (MSA). | NADP-dependent malic enzyme (NADP-ME). | 0.974 |
aceB | mdh | plu4396 | plu4547 | Malate synthase A (MSA). | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.935 |
aceB | pckA | plu4396 | plu0100 | Malate synthase A (MSA). | Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.859 |
aceB | plu3138 | plu4396 | plu3138 | Malate synthase A (MSA). | Citrate synthase; Unnamed protein product; Weakly similar to citrate synthase. | 0.948 |
aceB | ppc | plu4396 | plu4746 | Malate synthase A (MSA). | Phosphoenolpyruvate carboxylase (PEPCASE) (PEPC); Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.854 |
aspC | fumC | plu1750 | plu2359 | Aspartate aminotransferase (transaminase A). | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.856 |
aspC | gltA | plu1750 | plu1425 | Aspartate aminotransferase (transaminase A). | Citrate synthase; Belongs to the citrate synthase family. | 0.838 |
aspC | icd | plu1750 | plu2801 | Aspartate aminotransferase (transaminase A). | Isocitrate dehydrogenase [NADP]. | 0.861 |
aspC | mdh | plu1750 | plu4547 | Aspartate aminotransferase (transaminase A). | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.927 |
aspC | pckA | plu1750 | plu0100 | Aspartate aminotransferase (transaminase A). | Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.829 |
aspC | plu3138 | plu1750 | plu3138 | Aspartate aminotransferase (transaminase A). | Citrate synthase; Unnamed protein product; Weakly similar to citrate synthase. | 0.838 |
fumC | aceB | plu2359 | plu4396 | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Malate synthase A (MSA). | 0.928 |
fumC | aspC | plu2359 | plu1750 | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Aspartate aminotransferase (transaminase A). | 0.856 |
fumC | gltA | plu2359 | plu1425 | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Citrate synthase; Belongs to the citrate synthase family. | 0.874 |
fumC | icd | plu2359 | plu2801 | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Isocitrate dehydrogenase [NADP]. | 0.490 |
fumC | maeA | plu2359 | plu1546 | Fumarate hydratase class II (fumarase); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Malate dehydrogenase (oxaloacetate-decarboxylating); Belongs to the malic enzymes family. | 0.949 |
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