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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insATransposase, IS1 family. (100 aa)    
Predicted Functional Partners:
plu0416
Unnamed protein product; Similar to outer membrane usher protein precursor.
  
     0.617
mrfC
Outer membrane usher protein MrfC.
  
     0.607
mrfD
MrfD protein; Highly similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis.
  
     0.477
plu0415
Unnamed protein product; Similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis.
  
     0.463
plu4615
IPPc domain-containing protein; Unnamed protein product; Unknown protein.
       0.456
mrfG
MrfG protein; Highly similar to fimbrial protein MrpG of Proteus mirabilis, a putative minor subunit of the MR/P fimbria, functions as an adhesin responsible for hemagglutination.
  
     0.451
plu0136
DUF4942 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.422
plu4614
Uncharacterized protein; N-terminal region of truncated transposase, IS4 family.
       0.407
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.