Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
plu4630AlcB domain-containing protein; Unnamed protein product; Similar to rhizobactin and aerobactin siderophores biosynthesis proteins RhsF and LucC. (805 aa)    
Predicted Functional Partners:
plu4629
Unnamed protein product; Similar to alcaligin synthesis protein AlcA and to putative monooxigenase.
 
  
 0.912
plu4268
Unnamed protein product; Similar to L-ornithine 5-monooxygenase (L-ornithine N5-oxygenase).
 
  
 0.909
plu4262
Unnamed protein product; Similar to L-ornithine 5-monooxygenase (L-ornithine N5-oxygenase).
 
  
 0.904
plu4628
Unnamed protein product; Similar to L-2,4-diaminobutyrate decarboxylase.
 
  
 0.833
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
  
 0.750
plu4269
Unnamed protein product; Similar to amino acid decarboxylase.
 
  
 0.739
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.738
plu2341
Unnamed protein product; Some similarities with decarboxylase.
 
  
 0.528
plu2642
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
  
 0.528
fhuE
FhuE receptor precursor (Outer-membrane receptor for ferric iron uptake).
  
  
 0.507
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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