STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4672LuxE domain-containing protein; Unnamed protein product; Some similarities with long-chain-fatty-acid-luciferin-component ligase. (392 aa)    
Predicted Functional Partners:
plu4674
Aminotran_5 domain-containing protein; Unnamed protein product; Some similarities with NifS protein, a cysteine desulfurase.
       0.778
plu4673
NifU_N domain-containing protein; Unnamed protein product; Some similarities with nitrogen fixation proteins.
       0.776
luxC
Fatty acid reductase; LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase.
 
 
 
 0.772
plu4675
Unnamed protein product; Similar to acyl carrier protein.
       0.714
plu4180
Unnamed protein product; Some similarities with fatty-acyl-CoA reductase.
 
     0.713
plu4179
Unnamed protein product; Similar to the phenylacetyl-CoA ligase (in the phenylacetic acid catabolic pathway).
 
     0.695
paaK
Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase) (PA-CoA ligase).
 
     0.644
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.492
plu4676
PKS_KS domain-containing protein; Unnamed protein product; Similar to 3-oxoacyl-[acyl-carrier-protein] synthase II (beta-ketoacyl-ACP synthase II) (KAS II); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.450
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.