Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wblAWblA protein; Similar to putative UDP-glucose/GDP-mannose dehydrogenase. (436 aa)    
Predicted Functional Partners:
wblB
WblB protein; Similar to putative dehydrogenase.
 
 
 0.991
wecB
UDP-N-acetylglucosamine 2-epimerase (UDP-GlcNAc-2-epimerase); Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.
 
 0.976
wblM
WblM protein; Similar to TrsG which plays a putative role in galactose modification.
 
 
 0.938
glmU
UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to [...]
  
 
 0.918
wblG
WblG protein; Similar to probable glycosyltransferase.
 
  
 0.914
wzxA
WzxA protein; Some similarities with O-antigen translocase. Putative transmembrane secreted protein.
 
  
 0.879
wblC
WblC protein; Similar to putative acetyltransferase.
 
     0.874
wblI
WblI protein; Similar to probable glycosyltransferase.
 
  
 0.861
wblD
WblD protein; Highly similar to probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.855
wblH
WblH protein; Similar to probable UDP-N-acetylglucosamine 2-epimerase.
  
 0.844
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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