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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wzxAWzxA protein; Some similarities with O-antigen translocase. Putative transmembrane secreted protein. (405 aa)    
Predicted Functional Partners:
wblG
WblG protein; Similar to probable glycosyltransferase.
 
  
 0.954
wblC
WblC protein; Similar to putative acetyltransferase.
 
  
 0.947
wblA
WblA protein; Similar to putative UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.883
wblB
WblB protein; Similar to putative dehydrogenase.
 
  
 0.873
wblI
WblI protein; Similar to probable glycosyltransferase.
 
  
 0.857
wblD
WblD protein; Highly similar to probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.847
wblL
WblL protein.
       0.789
wblE
WblE protein; Weakly similar to unknown protein. Putative transmembrane protein.
       0.784
plu2500
UDP-glucose 6-dehydrogenase; Unnamed protein product; Highly similar to probable nucleotide sugar dehydrogenase and UDP-glucose dehydrogenase.
  
  
 0.727
rffG
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.705
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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