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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wblEWblE protein; Weakly similar to unknown protein. Putative transmembrane protein. (368 aa)    
Predicted Functional Partners:
wblG
WblG protein; Similar to probable glycosyltransferase.
 
     0.816
wblC
WblC protein; Similar to putative acetyltransferase.
 
     0.814
wzxA
WzxA protein; Some similarities with O-antigen translocase. Putative transmembrane secreted protein.
       0.784
wblL
WblL protein.
       0.781
wblD
WblD protein; Highly similar to probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.778
wblB
WblB protein; Similar to putative dehydrogenase.
 
     0.762
wblA
WblA protein; Similar to putative UDP-glucose/GDP-mannose dehydrogenase.
       0.737
plu4257
DUF3327 domain-containing protein; Unnamed protein product; Some similarities with enterochelin esterase Fes (ferric enterobactin esterase). Putative secreted protein.
    
   0.547
plu1900
Unnamed protein product; Similar to unknown protein of Photorhabdus.
    
 
 0.538
plu2057
Unnamed protein product; Some similarities with putative adhesin, invasin and intimin.
    
 
 0.538
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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