Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
wblPWblP protein. (135 aa)    
Predicted Functional Partners:
wblC
WblC protein; Similar to putative acetyltransferase.
      0.912
wblQ
WblQ protein; Similar to putative amino transferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.876
wzxB
WzxB protein; Some similarities with putative lipopolysaccharide biosynthesis protein.
 
  
 0.780
wblD
WblD protein; Highly similar to probable aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.654
wzxE
Lipopolysaccharide biosynthesis protein; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.
 
  
 0.579
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
     
 0.561
plu2404
Unnamed protein product; Some similarities with aspartate aminotransferase and perosamine synthetase. Two candidate membrane-spanning segments; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.510
wzc
Tyrosine-protein kinase Wzc.
  
  
 0.499
pbgP1
PbgP1 protein; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
  
 0.483
wblK
WblK protein; Highly similar to putative hydro-lyase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.452
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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