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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wblTWblT protein; Some similarities with exopolysaccharide biosynthesis protein. (263 aa)    
Predicted Functional Partners:
wblU
WblU protein; Some similarities with glycosyl transferase.
 
   
 0.819
wblV
WblV protein; Some similarities with the N-terminal region of GDP-mannose 4,6-dehydratase.
       0.762
plu2411
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Some similarities with glycosyltransferase.
 
   
 0.741
plu3015
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Similar to putative glycosyltransferase.
 
 
 0.708
plu3750
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Similar to putative glycosyl transferase.
 
 
 0.639
plu4290
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Similar to glycosyltransferase.
 
 
 0.611
pbgP4
PbgP4 protein; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.
  
  
 0.598
plu3018
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Similar to putative galactosyl transferase or beta-glucosyltransferase.
 
 
 0.596
plu2797
Unnamed protein product; Hypothetical protein.
  
 
 0.552
arcB
Aerobic respiration control sensor protein.
  
 
 0.551
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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