STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipAHipA protein. (439 aa)    
Predicted Functional Partners:
hipB
HipB protein.
 
  
 0.963
gltX
glutamyl-tRNA synthetase, catalytic subunit; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
      
 0.461
plu0510
Unnamed protein product; Similar to unknown protein.
  
     0.451
plu3594
Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related protein.
  
     0.448
plu0508
Unnamed protein product; Similar to unknown protein. Putative secreted protein.
  
     0.445
plu0225
Haemagg_act domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related protein. Putative transmembrane protein.
  
     0.441
plu2453
Haemagg_act domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related protein. Putative transmembrane protein.
  
     0.440
plu2423
Unnamed protein product; Similar to unknown protein.
 
   
 0.433
plu0228
PMT_2 domain-containing protein; Truncated gene. Some similarities with binding protein component of ABC transporter.
  
     0.424
plu3064
Haemagg_act domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.421
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.