Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACF06984.1Conserved hypothetical membrane protein. (335 aa)    
Predicted Functional Partners:
ACF06983.1
Ribonuclease BN-like family enzyme.
 
     0.872
oppF-valS
Fusion of oligopeptide transport protein OppF and Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
    0.825
cbiQ
Cobalt ABC transporter, permease protein.
  
 
 0.776
ACF07237.1
Putative esterase or lipase, membrane protein.
 
     0.774
ACF07306.1
Conserved hypothetical lipoprotein.
 
     0.772
potD1
Spermidine/putrescine ABC transporter substrate binding protein.
 
     0.767
potD2
Spermidine/putrescine ABC transporter substrate binding protein.
 
     0.766
ACF07061.1
Mycoplasma hominis P80-related membrane protein.
  
     0.764
ACF07268.1
Hypothetical lipoprotein.
  
     0.762
ACF07455.1
ABC transporter permease protein.
  
     0.762
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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