Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACF06998.1 | deoB | MARTH_orf032 | MARTH_orf033 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.675 |
| ACF06998.1 | proS | MARTH_orf032 | MARTH_orf031 | Hypothetical protein. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.689 |
| ACF06998.1 | pyk | MARTH_orf032 | MARTH_orf034 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.446 |
| ACF07449.1 | deoB | MARTH_orf683 | MARTH_orf033 | Conserved hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.912 |
| ACF07449.1 | deoC | MARTH_orf683 | MARTH_orf239 | Conserved hypothetical protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.869 |
| ACF07449.1 | prsA | MARTH_orf683 | MARTH_orf112 | Conserved hypothetical protein. | Phosphoribosylpyrophosphate synthetase. | 0.941 |
| ACF07449.1 | rpiB | MARTH_orf683 | MARTH_orf654 | Conserved hypothetical protein. | Ribose-5-phosphate isomerase B. | 0.911 |
| ACF07449.1 | tktA | MARTH_orf683 | MARTH_orf277 | Conserved hypothetical protein. | Transketolase; Belongs to the transketolase family. | 0.933 |
| deoA | deoB | MARTH_orf238 | MARTH_orf033 | Pyrimidine-nucleoside phosphorylase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.933 |
| deoA | deoC | MARTH_orf238 | MARTH_orf239 | Pyrimidine-nucleoside phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.955 |
| deoA | deoD | MARTH_orf238 | MARTH_orf237 | Pyrimidine-nucleoside phosphorylase. | Purine nucleoside phosphorylase. | 0.987 |
| deoB | ACF06998.1 | MARTH_orf033 | MARTH_orf032 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Hypothetical protein. | 0.675 |
| deoB | ACF07449.1 | MARTH_orf033 | MARTH_orf683 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Conserved hypothetical protein. | 0.912 |
| deoB | deoA | MARTH_orf033 | MARTH_orf238 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Pyrimidine-nucleoside phosphorylase. | 0.933 |
| deoB | deoC | MARTH_orf033 | MARTH_orf239 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.993 |
| deoB | deoD | MARTH_orf033 | MARTH_orf237 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Purine nucleoside phosphorylase. | 0.894 |
| deoB | proS | MARTH_orf033 | MARTH_orf031 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). | 0.615 |
| deoB | prsA | MARTH_orf033 | MARTH_orf112 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Phosphoribosylpyrophosphate synthetase. | 0.911 |
| deoB | pyk | MARTH_orf033 | MARTH_orf034 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.664 |
| deoB | rpiB | MARTH_orf033 | MARTH_orf654 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Ribose-5-phosphate isomerase B. | 0.929 |
page 1 of 3