Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACF07093.1 | tdk | MARTH_orf168 | MARTH_orf165 | Conserved hypothetical protein. | Thymidine kinase. | 0.534 |
ACF07093.1 | ychF | MARTH_orf168 | MARTH_orf169 | Conserved hypothetical protein. | Putative GTPase translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.739 |
cdd | deoA | MARTH_orf331 | MARTH_orf238 | Cytidine deaminase. | Pyrimidine-nucleoside phosphorylase. | 0.942 |
cdd | deoD | MARTH_orf331 | MARTH_orf237 | Cytidine deaminase. | Purine nucleoside phosphorylase. | 0.944 |
cdd | tdk | MARTH_orf331 | MARTH_orf165 | Cytidine deaminase. | Thymidine kinase. | 0.921 |
cdd | tmk | MARTH_orf331 | MARTH_orf161 | Cytidine deaminase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.500 |
cdd | ushA | MARTH_orf331 | MARTH_orf332 | Cytidine deaminase. | 5' nucleosidase, lipoprotein; Belongs to the 5'-nucleotidase family. | 0.951 |
dctD | tdk | MARTH_orf406 | MARTH_orf165 | Deoxycytidylate deaminase. | Thymidine kinase. | 0.924 |
dctD | tmk | MARTH_orf406 | MARTH_orf161 | Deoxycytidylate deaminase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.926 |
dctD | ushA | MARTH_orf406 | MARTH_orf332 | Deoxycytidylate deaminase. | 5' nucleosidase, lipoprotein; Belongs to the 5'-nucleotidase family. | 0.904 |
deoA | cdd | MARTH_orf238 | MARTH_orf331 | Pyrimidine-nucleoside phosphorylase. | Cytidine deaminase. | 0.942 |
deoA | deoD | MARTH_orf238 | MARTH_orf237 | Pyrimidine-nucleoside phosphorylase. | Purine nucleoside phosphorylase. | 0.987 |
deoA | tdk | MARTH_orf238 | MARTH_orf165 | Pyrimidine-nucleoside phosphorylase. | Thymidine kinase. | 0.930 |
deoA | upp | MARTH_orf238 | MARTH_orf240 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.975 |
deoA | ushA | MARTH_orf238 | MARTH_orf332 | Pyrimidine-nucleoside phosphorylase. | 5' nucleosidase, lipoprotein; Belongs to the 5'-nucleotidase family. | 0.906 |
deoD | cdd | MARTH_orf237 | MARTH_orf331 | Purine nucleoside phosphorylase. | Cytidine deaminase. | 0.944 |
deoD | deoA | MARTH_orf237 | MARTH_orf238 | Purine nucleoside phosphorylase. | Pyrimidine-nucleoside phosphorylase. | 0.987 |
deoD | tdk | MARTH_orf237 | MARTH_orf165 | Purine nucleoside phosphorylase. | Thymidine kinase. | 0.941 |
deoD | upp | MARTH_orf237 | MARTH_orf240 | Purine nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.961 |
deoD | ushA | MARTH_orf237 | MARTH_orf332 | Purine nucleoside phosphorylase. | 5' nucleosidase, lipoprotein; Belongs to the 5'-nucleotidase family. | 0.907 |
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