Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACF07160.1Conserved hypothetical protein. (706 aa)    
Predicted Functional Partners:
ACF07157.1
Conserved hypothetical protein.
 
     0.950
ACF07158.1
Conserved hypothetical protein.
 
     0.950
ACF07328.1
Conserved hypothetical membrane protein.
 
   
 0.795
ACF07327.1
Conserved hypothetical lipoprotein.
 
     0.794
ACF07159.1
Conserved hypothetical protein.
     
 0.792
ACF07324.1
Conserved hypothetical protein.
 
     0.790
ACF07325.1
Conserved hypothetical protein.
 
     0.790
ACF07156.1
Hypothetical membrane protein.
       0.788
atpA2
ATP synthase subunit A.
 
     0.760
licA
PTS lichenan-specific IIa component.
  
     0.711
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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