Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACF07230.1 | ACF07231.1 | MARTH_orf352 | MARTH_orf353 | Hypothetical membrane protein. | Cysteine protease. | 0.452 |
| ACF07230.1 | ffh | MARTH_orf352 | MARTH_orf350 | Hypothetical membrane protein. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.718 |
| ACF07231.1 | ACF07230.1 | MARTH_orf353 | MARTH_orf352 | Cysteine protease. | Hypothetical membrane protein. | 0.452 |
| ACF07231.1 | ACF07501.1 | MARTH_orf353 | MARTH_orf753 | Cysteine protease. | Amino acid permease. | 0.502 |
| ACF07231.1 | dnaK | MARTH_orf353 | MARTH_orf781 | Cysteine protease. | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | 0.405 |
| ACF07231.1 | ffh | MARTH_orf353 | MARTH_orf350 | Cysteine protease. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.439 |
| ACF07231.1 | rpsK | MARTH_orf353 | MARTH_orf412 | Cysteine protease. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.582 |
| ACF07501.1 | ACF07231.1 | MARTH_orf753 | MARTH_orf353 | Amino acid permease. | Cysteine protease. | 0.502 |
| dnaK | ACF07231.1 | MARTH_orf781 | MARTH_orf353 | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | Cysteine protease. | 0.405 |
| dnaK | ffh | MARTH_orf781 | MARTH_orf350 | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.507 |
| dnaK | rpsK | MARTH_orf781 | MARTH_orf412 | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.902 |
| ffh | ACF07230.1 | MARTH_orf350 | MARTH_orf352 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Hypothetical membrane protein. | 0.718 |
| ffh | ACF07231.1 | MARTH_orf350 | MARTH_orf353 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Cysteine protease. | 0.439 |
| ffh | dnaK | MARTH_orf350 | MARTH_orf781 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | 0.507 |
| ffh | rpsK | MARTH_orf350 | MARTH_orf412 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.988 |
| rpsK | ACF07231.1 | MARTH_orf412 | MARTH_orf353 | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | Cysteine protease. | 0.582 |
| rpsK | dnaK | MARTH_orf412 | MARTH_orf781 | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | Molecular chaperone DnaK; Belongs to the heat shock protein 70 family. | 0.902 |
| rpsK | ffh | MARTH_orf412 | MARTH_orf350 | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.988 |