Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACF07232.1Massive surface protein MspB. (1934 aa)    
Predicted Functional Partners:
mspK
Massive surface protein MspK.
 
 
 
0.643
mspH
Massive surface protein MspH.
 
 
 
0.533
mspC
Massive surface protein MspC.
   
 
 0.517
mspD
Massive surface protein MspD.
   
 
 0.517
mspF
Massive surface protein MspF.
   
 
 0.517
mspG
Massive surface protein MspG.
   
 
 0.517
ACF07237.1
Putative esterase or lipase, membrane protein.
  
   0.450
ACF07307.1
Conserved hypothetical lipoprotein.
  
   0.442
ACF07379.1
Hypothetical lipoprotein, potential protease.
  
   0.442
ACF07233.1
Hypothetical lipoprotein.
       0.423
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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