STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa)    
Predicted Functional Partners:
xfp
Phosphoketolase ''D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase.
 
  
 0.868
mdlB1
ABC-type multidrug transport system.
       0.684
mdlB2
ABC-type multidrug transport system.
       0.684
mspK
Massive surface protein MspK.
  
  
 0.580
metS
methionyl-tRNA synthetase.
  
  
 0.547
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
       0.537
ACF07449.1
Conserved hypothetical protein.
  
  
 0.513
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
 0.466
dnaE
DNA polymerase III subunit alpha.
    
 0.465
pgiB
Glucose-6-phosphate isomerase.
  
  
 0.444
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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