STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpeRibulose-phosphate 3-epimerase. (215 aa)    
Predicted Functional Partners:
tktA
Transketolase; Belongs to the transketolase family.
 
 0.996
engC
GTPase YjeQ/EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
    0.978
rpiB
Ribose-5-phosphate isomerase B.
  
 
 0.964
ACF07478.1
Serine/threonine protein kinase.
 
  
 0.722
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
 0.659
ACF07477.1
Phosphoprotein serine/threonine phosphatase.
  
    0.590
ACF07481.1
Conserved membrane protein.
       0.578
prsA
Phosphoribosylpyrophosphate synthetase.
  
  
 0.548
ACF07475.1
N6-adenine-specific methylase.
       0.525
pgiB
Glucose-6-phosphate isomerase.
     
 0.522
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.