Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACF07490.1Conserved hypothetical protein. (453 aa)    
Predicted Functional Partners:
ACF07028.1
Hypothetical lipoprotein.
  
     0.682
mnuA
Membrane nuclease A.
 
     0.639
ACF07406.1
Hypothetical protein.
 
     0.624
ACF07483.1
Membrane nuclease.
 
     0.612
adhA
Zn-dependent alcohol dehydrogenase.
  
    0.570
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.556
ACF07501.1
Amino acid permease.
 
    0.493
smc
Chromosome segregation ATPase Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.488
ACF07488.1
Hypothetical lipoprotein.
       0.472
ACF07046.1
P37-like ABC transporter substrate-binding lipoprotein.
  
     0.430
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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