Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACF07501.1Amino acid permease. (561 aa)    
Predicted Functional Partners:
dexB
Oligo-1,6-glucosidase, probable membrane protein.
  
 0.951
ACF07198.1
Conserved hypothetical protein.
 
     0.736
ACF07046.1
P37-like ABC transporter substrate-binding lipoprotein.
  
     0.735
ACF07027.1
Conserved hypothetical membrane protein.
 
     0.724
ACF07483.1
Membrane nuclease.
 
 
   0.724
mnuA
Membrane nuclease A.
 
 
   0.706
ACF07455.1
ABC transporter permease protein.
 
     0.669
ACF07466.1
Putative ATP-binding helicase.
 
    0.647
mspK
Massive surface protein MspK.
  
 
 0.579
ACF07093.1
Conserved hypothetical protein.
 
     0.572
Your Current Organism:
Mycoplasma arthritidis
NCBI taxonomy Id: 243272
Other names: M. arthritidis 158L3-1, Mycoplasma arthritidis 158L3-1, Mycoplasma arthritidis str. 158L3-1, Mycoplasma arthritidis strain 158L3-1
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