Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACF07532.1 | ACF07533.1 | MARTH_orf795 | MARTH_orf796 | Hypothetical membrane protein. | Conserved hypothetical protein. | 0.773 |
ACF07532.1 | gyrB | MARTH_orf795 | MARTH_orf800 | Hypothetical membrane protein. | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.757 |
ACF07532.1 | lemA | MARTH_orf795 | MARTH_orf801 | Hypothetical membrane protein. | Conserved hypothetical membrane protein LemA. | 0.453 |
ACF07532.1 | licA | MARTH_orf795 | MARTH_orf798 | Hypothetical membrane protein. | PTS lichenan-specific IIa component. | 0.757 |
ACF07533.1 | ACF07532.1 | MARTH_orf796 | MARTH_orf795 | Conserved hypothetical protein. | Hypothetical membrane protein. | 0.773 |
ACF07533.1 | ACF07539.1 | MARTH_orf796 | MARTH_orf805 | Conserved hypothetical protein. | Hypothetical protein. | 0.433 |
ACF07533.1 | gyrB | MARTH_orf796 | MARTH_orf800 | Conserved hypothetical protein. | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.757 |
ACF07533.1 | lemA | MARTH_orf796 | MARTH_orf801 | Conserved hypothetical protein. | Conserved hypothetical membrane protein LemA. | 0.458 |
ACF07533.1 | licA | MARTH_orf796 | MARTH_orf798 | Conserved hypothetical protein. | PTS lichenan-specific IIa component. | 0.847 |
ACF07537.1 | ACF07539.1 | MARTH_orf803 | MARTH_orf805 | Hypothetical protein. | Hypothetical protein. | 0.603 |
ACF07537.1 | ACF07540.1 | MARTH_orf803 | MARTH_orf806 | Hypothetical protein. | Conserved hypothetical protein. | 0.603 |
ACF07537.1 | gcp | MARTH_orf803 | MARTH_orf804 | Hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.603 |
ACF07537.1 | lemA | MARTH_orf803 | MARTH_orf801 | Hypothetical protein. | Conserved hypothetical membrane protein LemA. | 0.698 |
ACF07537.1 | msrA | MARTH_orf803 | MARTH_orf807 | Hypothetical protein. | Peptide methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.599 |
ACF07539.1 | ACF07533.1 | MARTH_orf805 | MARTH_orf796 | Hypothetical protein. | Conserved hypothetical protein. | 0.433 |
ACF07539.1 | ACF07537.1 | MARTH_orf805 | MARTH_orf803 | Hypothetical protein. | Hypothetical protein. | 0.603 |
ACF07539.1 | ACF07540.1 | MARTH_orf805 | MARTH_orf806 | Hypothetical protein. | Conserved hypothetical protein. | 0.999 |
ACF07539.1 | gcp | MARTH_orf805 | MARTH_orf804 | Hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
ACF07539.1 | lemA | MARTH_orf805 | MARTH_orf801 | Hypothetical protein. | Conserved hypothetical membrane protein LemA. | 0.553 |
ACF07539.1 | licA | MARTH_orf805 | MARTH_orf798 | Hypothetical protein. | PTS lichenan-specific IIa component. | 0.576 |
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