Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MG_045 | metK | MG_045 | MG_047 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.840 |
| MG_045 | potA | MG_045 | MG_042 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | Spermidine/putrescine ABC transporter, ATP-binding protein, putative; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.979 |
| MG_045 | potB | MG_045 | MG_043 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | Spermidine/putrescine ABC transporter, permease protein, putative; Required for the activity of the bacterial transport system of putrescine and spermidine; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.988 |
| MG_045 | potC | MG_045 | MG_044 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | Spermidine/putrescine ABC transporter, permease protein, putative; Required for the activity of the bacterial transport system of putrescine and spermidine; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.990 |
| MG_045 | ptsH | MG_045 | MG_041 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | Phosphocarrier protein HPr; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain. | 0.478 |
| MG_045 | tsaD | MG_045 | MG_046 | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | Metalloendopeptidase, putative, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.841 |
| MG_323 | dnaJ | MG_323 | MG_019 | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.569 |
| MG_323 | metK | MG_323 | MG_047 | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.545 |
| MG_323 | potB | MG_323 | MG_043 | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | Spermidine/putrescine ABC transporter, permease protein, putative; Required for the activity of the bacterial transport system of putrescine and spermidine; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.547 |
| MG_323 | rpL34 | MG_323 | MG_466 | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | Ribosomal protein L34; Identified by similarity to SP:P02437; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.533 |
| MG_323 | tsaD | MG_323 | MG_046 | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | Metalloendopeptidase, putative, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.573 |
| dnaJ | MG_323 | MG_019 | MG_323 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | 0.569 |
| dnaJ | metK | MG_019 | MG_047 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.640 |
| dnaJ | mnmE | MG_019 | MG_008 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.913 |
| dnaJ | potB | MG_019 | MG_043 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Spermidine/putrescine ABC transporter, permease protein, putative; Required for the activity of the bacterial transport system of putrescine and spermidine; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.649 |
| dnaJ | rpL34 | MG_019 | MG_466 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribosomal protein L34; Identified by similarity to SP:P02437; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.509 |
| metK | MG_045 | MG_047 | MG_045 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative; MG045 is part of an ABC tranporter cassette for spermidine/putrescine transport that includes MG042, MG043, MG044. This is a predicted lipoprotein; identified by similarity to SP:P23861; match to protein family HMM PF02030. | 0.840 |
| metK | MG_323 | MG_047 | MG_323 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Potassium uptake protein, TrkA family; MG322, the adjacent gene, which is on the opposite strand encodes a trk potassium uptake protein. MG323 is a likely accessory protein; identified by similarity to EGAD:57150; match to protein family HMM PF02080; match to protein family HMM PF02254. | 0.545 |
| metK | dnaJ | MG_047 | MG_019 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.640 |
| metK | mnmE | MG_047 | MG_008 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.564 |
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