Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MG_303 | MG_304 | MG_303 | MG_304 | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | 0.997 |
| MG_303 | gap | MG_303 | MG_301 | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | 0.678 |
| MG_303 | pgk | MG_303 | MG_300 | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | Phosphoglycerate kinase; Identified by similarity to SP:P36204; match to protein family HMM PF00162. | 0.678 |
| MG_303 | pta | MG_303 | MG_299 | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | Phosphate acetyltransferase; Identified by similarity to SP:P39646; match to protein family HMM PF01515; match to protein family HMM TIGR00651. | 0.645 |
| MG_303 | smc | MG_303 | MG_298 | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.418 |
| MG_304 | MG_303 | MG_304 | MG_303 | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | 0.997 |
| MG_304 | gap | MG_304 | MG_301 | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | 0.678 |
| MG_304 | pgk | MG_304 | MG_300 | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | Phosphoglycerate kinase; Identified by similarity to SP:P36204; match to protein family HMM PF00162. | 0.678 |
| MG_304 | pta | MG_304 | MG_299 | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | Phosphate acetyltransferase; Identified by similarity to SP:P39646; match to protein family HMM PF01515; match to protein family HMM TIGR00651. | 0.645 |
| ackA | gap | MG_357 | MG_301 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | 0.409 |
| ackA | pdhC | MG_357 | MG_272 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). | 0.450 |
| ackA | pgi | MG_357 | MG_111 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Glucose-6-phosphate isomerase; MG111 has 1 transmembrane region; identified by similarity to SP:P81181; match to protein family HMM PF00342. | 0.588 |
| ackA | pgk | MG_357 | MG_300 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphoglycerate kinase; Identified by similarity to SP:P36204; match to protein family HMM PF00162. | 0.701 |
| ackA | pta | MG_357 | MG_299 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate acetyltransferase; Identified by similarity to SP:P39646; match to protein family HMM PF01515; match to protein family HMM TIGR00651. | 0.996 |
| ackA | ptsG | MG_357 | MG_069 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | PTS system, glucose-specific IIABC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in glucose transport. | 0.694 |
| gap | MG_303 | MG_301 | MG_303 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | Metal ion ABC transporter, ATP-binding protein, putative; MG303 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0131; match to protein family HMM PF00005. | 0.678 |
| gap | MG_304 | MG_301 | MG_304 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | Metal ion ABC transporter, ATP binding protein, putative; MG304 is part of an ABC transporter cassette comprised of MG302-MG303-MG304. There is no predicted substrate binding protein in the vicinity. MG302, the permease, is similar to cobalt transport proteins; identified by similarity to OMNI:NTL01BC0130; match to protein family HMM PF00005. | 0.678 |
| gap | ackA | MG_301 | MG_357 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.409 |
| gap | manB | MG_301 | MG_053 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | Phosphoglucomutase/phosphomannomutase, putative; Identified by similarity to EGAD:56902; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; Belongs to the phosphohexose mutase family. | 0.419 |
| gap | pdhC | MG_301 | MG_272 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. | Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). | 0.485 |
page 1 of 4