STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0024Laminarinase; Similar to PID:1143599 percent identity: 95.48; identified by sequence similarity; putative. (642 aa)    
Predicted Functional Partners:
TM_0025
Beta-glucosidase; Similar to PID:1483615 percent identity: 92.80; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 3 family.
 
 0.858
TM_0029
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 70.18; identified by sequence similarity; putative.
 
     0.797
TM_0028
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 68.97; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
     0.787
TM_0026
Hypothetical protein; Identified by sequence similarity; putative.
       0.768
TM_0027
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 71.10; identified by sequence similarity; putative.
       0.768
TM_0030
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 68.01; identified by sequence similarity; putative.
       0.757
TM_0031
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000511 PID:2314416 percent identity: 45.23; identified by sequence similarity; putative.
 
     0.699
TM_0023
Methyl-accepting chemotaxis protein; Similar to GB:L29189 SP:P39216 PID:459689 GB:AL009126 percent identity: 50.39; identified by sequence similarity; putative.
       0.594
TM_0033
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.592
xynA
Similar to PID:559960 SP:Q60037 GB:AE000512 percent identity: 100.00; identified by sequence similarity; putative.
 
   
 0.566
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.