STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0028Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 68.97; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
TM_0029
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 70.18; identified by sequence similarity; putative.
   0.976
TM_0030
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 68.01; identified by sequence similarity; putative.
 
   0.948
TM_1748
Oligopeptide ABC transporter, permease protein; Similar to GB:M57689 SP:P24139 GB:X56347 PID:143606 PID:40007 percent identity: 64.69; identified by sequence similarity; putative.
 
   0.942
TM_1221
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 72.40; identified by sequence similarity; putative.
   0.940
TM_1153
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 78.39; identified by sequence similarity; putative.
 
   0.938
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
    
0.868
TM_0027
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 71.10; identified by sequence similarity; putative.
 
    
0.854
TM_0031
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000511 PID:2314416 percent identity: 45.23; identified by sequence similarity; putative.
 
   0.852
TM_0352
ABC transporter, ATP-binding protein; Similar to GB:AE000782 percent identity: 79.46; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
     
0.843
TM_0502
Oligopeptide ABC transporter, permease protein; Similar to SP:P42063 PID:677947 GB:AL009126 percent identity: 63.90; identified by sequence similarity; putative.
 
   0.838
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.