STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0032Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 51.23; identified by sequence similarity; putative. (381 aa)    
Predicted Functional Partners:
TM_0393
Transcriptional regulator, XylR-related; Similar to GP:580652 percent identity: 52.26; identified by sequence similarity; putative.
  
 
  0.796
TM_0031
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000511 PID:2314416 percent identity: 45.23; identified by sequence similarity; putative.
 
   
 0.745
xylA
Xylose isomerase; Similar to SP:P45687 PID:625180 percent identity: 71.21; identified by sequence similarity; putative; Belongs to the xylose isomerase family.
    
 0.650
TM_0110
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 59.47; identified by sequence similarity; putative.
  
 
0.631
TM_0273
Fructose-bisphosphate aldolase; Similar to GB:AE000657 percent identity: 78.33; identified by sequence similarity; putative.
    
 0.630
TM_0025
Beta-glucosidase; Similar to PID:1483615 percent identity: 92.80; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.604
pgk/tpi
Phosphoglycerate kinase/triose-phosphate isomerase; Similar to PIR:S54289 percent identity: 99.69; identified by sequence similarity; putative; In the N-terminal section; belongs to the phosphoglycerate kinase family.
     
 0.578
TM_1762
Transketolase, putative; Similar to GP:452486 percent identity: 53.52; identified by sequence similarity; putative.
  
 
 0.576
TM_0282
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.567
TM_0155
Chorismate mutase/prephenate dehydratase; Similar to GB:AE000782 percent identity: 80.45; identified by sequence similarity; putative.
  
  
 0.558
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.