STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0048Transposase; Similar to PID:1054866 PID:2271024 percent identity: 69.88; identified by sequence similarity; putative. (108 aa)    
Predicted Functional Partners:
TM_0047
Transposase, putative; Similar to GB:L77117 SP:Q58161 PID:1591465 percent identity: 56.82; identified by sequence similarity; putative.
 
    0.857
TM_0046
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_0049
Iron-sulfur cluster-binding protein; Similar to GB:AE000666 percent identity: 56.54; identified by sequence similarity; putative.
       0.572
TM_1044
Transposase, IS605-TnpB family; Similar to GB:AE000511 PID:2313541 PID:2314128 PID:2314141 PID:2314245 percent identity: 62.77; identified by sequence similarity; putative.
 
    0.542
TM_0135
Transposase, putative; Similar to GB:U00096 PID:1787702 percent identity: 52.80; identified by sequence similarity; putative.
 
    0.473
TM_1003
Transposase-related protein; Similar to GB:L77117 SP:Q58161 PID:1591465 percent identity: 52.76; identified by sequence similarity; putative.
 
    0.455
TM_0050
iron(II) transport protein A; Similar to SP:P33649 PID:414746 PID:606343 GB:U00096 PID:1789812 percent identity: 63.79; identified by sequence similarity; putative.
       0.401
TM_0051
iron(II) transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.401
TM_0052
Hypothetical protein; Identified by sequence similarity; putative.
       0.401
TM_0053
Esterase, putative; Similar to PID:1708751 percent identity: 57.35; identified by sequence similarity; putative.
       0.401
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.