STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0060Oligopeptide ABC transporter, permease protein; Similar to SP:P42062 PID:677946 GB:AL009126 percent identity: 61.32; identified by sequence similarity; putative. (328 aa)    
Predicted Functional Partners:
TM_0059
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 65.90; identified by sequence similarity; putative.
 
 0.966
TM_0056
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative; Similar to GB:J05433 SP:P23843 GB:M60918 PID:1183023 PID:147014 percent identity: 50.16; identified by sequence similarity; putative.
 
 0.959
TM_1065
Oligopeptide ABC transporter, permease protein; Similar to GB:AE000657 percent identity: 67.80; identified by sequence similarity; putative.
 
  0.847
TM_0058
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42064 PID:677943 GB:AL009126 percent identity: 69.11; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 0.840
TM_0309
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 53.42; identified by sequence similarity; putative.
  
  0.836
TM_1067
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 51.34; identified by sequence similarity; putative.
  
  0.836
TM_0533
Oligopeptide ABC transporter, permease protein; Similar to PID:1001216 PID:1001269 percent identity: 71.65; identified by sequence similarity; putative.
 
 
  0.830
TM_0057
Oligopeptide ABC transporter, ATP-binding protein; Similar to SP:P42065 PID:677944 GB:AL009126 percent identity: 74.77; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 0.817
TM_0531
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000657 percent identity: 60.12; identified by sequence similarity; putative.
  
  0.624
TM_1150
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to GB:AE000782 percent identity: 66.76; identified by sequence similarity; putative.
 
 
  0.614
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.