Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TM_0083Flagellar hook-associated protein 1; Similar to SP:P70859 PID:1518046 GB:AE000783 percent identity: 49.92; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family. (858 aa)    
Predicted Functional Partners:
fliD
Flagellar hook-associated protein 2, putative; Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (By similarity).
 
 
 0.996
TM_0082
Flagellar hook-associated protein 3; Similar to SP:P96501 PID:1762339 GB:AL009126 percent identity: 56.38; identified by sequence similarity; putative.
 
 
 0.994
TM_1179
Flagellar protein FliS; Similar to GB:M85241 SP:P26609 GB:X52093 PID:153987 percent identity: 56.80; identified by sequence similarity; putative.
 
 
 0.985
TM_1365
Flagellar basal-body rod protein FlgC; Similar to PID:1165277 PID:1196316 SP:Q57466 GB:AE000783 percent identity: 72.46; identified by sequence similarity; putative; Belongs to the flagella basal body rod proteins family.
 
  
 0.984
fliG
Flagellar motor switch protein FliG; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.983
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheX chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity).
 
  
 0.982
TM_0221
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.979
TM_0676
Motility protein A; Similar to GB:L26052 SP:P46826 PID:415665 percent identity: 67.45; identified by sequence similarity; putative.
 
  
 0.979
TM_0673
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.975
TM_0758
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.974
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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