STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0088comE protein, putative; Similar to SP:P31772 GB:L42023 PID:1003754 PID:1222365 PID:148874 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the bacterial secretin family. (1285 aa)    
Predicted Functional Partners:
TM_0094
General secretion pathway protein F, putative; Similar to GB:AE000657 percent identity: 58.04; identified by sequence similarity; putative.
 
 
 0.952
TM_0837
General secretion pathway protein E; Similar to GB:AE000657 percent identity: 67.38; identified by sequence similarity; putative.
 
 
 0.873
TM_1271
Type IV pilin-related protein; Similar to SP:P35646 GB:Z12609 PID:41331 percent identity: 54.22; identified by sequence similarity; putative.
 
 
 0.841
TM_0087
Conserved hypothetical protein; Similar to PID:1707828 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the MEMO1 family.
       0.820
flhB
Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.816
TM_0091
Hypothetical protein; Identified by sequence similarity; putative.
       0.814
TM_0092
Hypothetical protein; Identified by sequence similarity; putative.
       0.812
TM_0089
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_0090
Hypothetical protein; Identified by sequence similarity; putative.
       0.773
TM_1362
Motility protein PilT; Similar to GB:AE000657 percent identity: 66.67; identified by sequence similarity; putative.
 
   
 0.748
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.