STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0090Hypothetical protein; Identified by sequence similarity; putative. (138 aa)    
Predicted Functional Partners:
TM_0089
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_0091
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_0092
Hypothetical protein; Identified by sequence similarity; putative.
       0.810
TM_0087
Conserved hypothetical protein; Similar to PID:1707828 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the MEMO1 family.
       0.773
TM_0088
comE protein, putative; Similar to SP:P31772 GB:L42023 PID:1003754 PID:1222365 PID:148874 percent identity: 65.23; identified by sequence similarity; putative; Belongs to the bacterial secretin family.
       0.773
TM_0093
Hypothetical protein; Identified by sequence similarity; putative.
       0.619
TM_0094
General secretion pathway protein F, putative; Similar to GB:AE000657 percent identity: 58.04; identified by sequence similarity; putative.
       0.619
TM_0095
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 55.12; identified by sequence similarity; putative.
       0.619
TM_0096
Conserved hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.564
nadD
Conserved hypothetical protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.564
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.