STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0111Alcohol dehydrogenase, iron-containing; Similar to SP:P71017 PID:1524393 GB:AL009126 percent identity: 54.08; identified by sequence similarity; putative. (387 aa)    
Predicted Functional Partners:
TM_0110
Transcriptional regulator, XylR-related; Similar to PID:1208894 SP:Q44406 percent identity: 59.47; identified by sequence similarity; putative.
    
 0.821
TM_0112
Sugar ABC transporter, permease protein; Similar to SP:P36948 GB:Z25798 PID:397498 PID:1894758 GB:AL009126 percent identity: 65.33; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
  
    0.759
gap
Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG (By similarity). Belongs to the glyceraldehyde-3-phospha [...]
 
  
 0.741
TM_0114
Sugar ABC transporter, periplasmic sugar-binding protein; Similar to SP:P36949 GB:Z25798 PID:397499 PID:1894757 GB:AL009126 percent identity: 51.00; identified by sequence similarity; putative.
  
  
 0.729
TM_0113
xylU-related protein; Similar to GP:2920659 percent identity: 67.66; identified by sequence similarity; putative.
       0.722
xylB
Sugar kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 59.50; identified by sequence similarity; putative.
     
 0.697
rbsA1
Sugar ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.689
TM_1217
Glutamate synthase, beta subunit; Similar to PID:2244618 percent identity: 58.52; identified by sequence similarity; putative.
  
 
 0.669
TM_1164
2-oxoacid ferredoxin oxidoreductase, alpha subunit; Similar to GB:AE000666 percent identity: 68.99; identified by sequence similarity; putative.
  
 
 0.652
TM_1425
Fe-hydrogenase, subunit beta; Similar to GP:2865516 percent identity: 100.00; identified by sequence similarity; putative.
  
 
 0.647
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.