STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA1Sugar ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (520 aa)    
Predicted Functional Partners:
TM_0112
Sugar ABC transporter, permease protein; Similar to SP:P36948 GB:Z25798 PID:397498 PID:1894758 GB:AL009126 percent identity: 65.33; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 0.999
TM_0955
Ribose ABC transporter, permease protein; Similar to SP:P36948 GB:Z25798 PID:397498 PID:1894758 GB:AL009126 percent identity: 70.57; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 0.995
TM_0114
Sugar ABC transporter, periplasmic sugar-binding protein; Similar to SP:P36949 GB:Z25798 PID:397499 PID:1894757 GB:AL009126 percent identity: 51.00; identified by sequence similarity; putative.
 
 0.988
TM_0958
Ribose ABC transporter, periplasmic ribose-binding protein; Similar to GB:L10328 SP:P02925 GB:K00511 GB:M13169 PID:147515 percent identity: 58.97; identified by sequence similarity; putative.
 0.961
rbsA2
Ribose ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     
  0.831
xylB
Sugar kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 59.50; identified by sequence similarity; putative.
  
  
 0.822
rbsD
Ribose ABC transporter, membrane-associated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.818
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
   0.800
TM_0113
xylU-related protein; Similar to GP:2920659 percent identity: 67.66; identified by sequence similarity; putative.
       0.732
TM_0104
Sugar ABC transporter, permease protein; Similar to GB:AE000782 percent identity: 59.01; identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
  
  0.721
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.