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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0179Hypothetical protein; Identified by sequence similarity; putative. (92 aa)    
Predicted Functional Partners:
TM_1423
Hypothetical protein; Identified by sequence similarity; putative.
 
     0.554
TM_1422
rnfB-related protein; Similar to PID:871466 percent identity: 56.34; identified by sequence similarity; putative.
 
     0.547
TM_1420
Hypothetical protein; Might be part of a multi-protein complex, possibly involved in metal cluster assembly.
  
     0.473
TM_1421
Hydrogenase, putative; Similar to GB:X57838 PID:40828 percent identity: 52.17; identified by sequence similarity; putative.
  
     0.442
TM_1021
Permease, putative; Similar to GP:2695718 percent identity: 100.00; identified by sequence similarity; putative.
  
     0.424
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.