Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TM_0241Hypothetical protein; Identified by sequence similarity; putative. (341 aa)    
Predicted Functional Partners:
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.819
TM_0239
Glucose-1-phosphate adenylyltransferase; Similar to GB:Z25795 SP:P39122 PID:397489 PID:2293137 GB:AL009126 percent identity: 60.99; identified by sequence similarity; putative; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.802
TM_0238
Hypothetical protein; Identified by sequence similarity; putative.
       0.664
TM_0243
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 58.74; identified by sequence similarity; putative.
       0.587
rnfC
Electron transport complex protein, putative; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
       0.587
rnfG
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
       0.587
rnfE
Na-translocating NADH-quinone reductase, Nqr4 subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.587
rnfA
Na-translocating NADH-quinone reductase, Nqr5 subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.587
TM_0249
rnfB-related protein; Similar to GB:D13625 PID:216928 PID:435526 PID:1905809 percent identity: 64.86; identified by sequence similarity; putative.
       0.586
TM_0250
DNA processing chain A; Similar to GB:L42023 SP:P43862 PID:1006171 PID:1221098 PID:609332 percent identity: 61.21; identified by sequence similarity; putative.
       0.586
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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