STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (496 aa)    
Predicted Functional Partners:
TM_0284
Sugar kinase, FGGY family; Similar to GB:AL009126 percent identity: 54.42; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
  
 
 0.975
TM_0282
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.962
TM_0310
beta-D-galactosidase; Similar to GB:L03424 PID:551691 percent identity: 68.26; identified by sequence similarity; putative.
   
 
  0.954
galA
Alpha-galactosidase; Hydrolyzes the short-chain alpha-galactosaccharides raffinose, melibiose and stachyose.
     
 0.954
TM_1195
Beta-galactosidase; Similar to GB:U08186 PID:473271 percent identity: 99.53; identified by sequence similarity; putative.
   
 
  0.948
lacZ
Beta-galactosidase; Similar to GB:U08186 PID:473272 GB:AE000512 percent identity: 99.61; identified by sequence similarity; putative.
     
  0.939
TM_0283
Sugar isomerase; Similar to GB:U14003 SP:P39306 PID:537039 GB:U00096 PID:1790642 percent identity: 60.75; identified by sequence similarity; putative.
 
 0.916
TM_0281
alpha-L-arabinofuranosidase; Similar to SP:P94531 PID:1770022 PID:1913931 GB:AL009126 percent identity: 58.66; identified by sequence similarity; putative.
 
 
 0.912
xylB
Sugar kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 59.50; identified by sequence similarity; putative.
  
 
 0.536
TM_1072
Sugar-phosphate aldolase; Similar to GB:L19201 SP:P32169 GB:X60472 PID:305006 PID:396681 percent identity: 51.83; identified by sequence similarity; putative.
  
 
 0.518
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.