STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM_0281alpha-L-arabinofuranosidase; Similar to SP:P94531 PID:1770022 PID:1913931 GB:AL009126 percent identity: 58.66; identified by sequence similarity; putative. (484 aa)    
Predicted Functional Partners:
TM_0280
Hypothetical protein; Identified by sequence similarity; putative.
 
   
 0.937
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.912
TM_1062
Beta-glucuronidase; Similar to PID:642973 PID:14446 PID:412358 percent identity: 57.73; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.896
uxaC
Uronate isomerase, putative; Similar to SP:P42607 PID:606033 GB:U00096 PID:2367192 percent identity: 58.33; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. Uronate isomerase family.
   
 
 0.838
xylA
Xylose isomerase; Similar to SP:P45687 PID:625180 percent identity: 71.21; identified by sequence similarity; putative; Belongs to the xylose isomerase family.
    
 0.826
TM_0283
Sugar isomerase; Similar to GB:U14003 SP:P39306 PID:537039 GB:U00096 PID:1790642 percent identity: 60.75; identified by sequence similarity; putative.
 
  
 0.770
TM_0070
Endo-1,4-beta-xylanase B; Similar to PID:1143603 SP:Q60041 percent identity: 93.93; identified by sequence similarity; putative.
 
  
 0.727
TM_0285
araM protein, putative; Similar to GB:AL009126 percent identity: 53.36; identified by sequence similarity; putative.
  
  
 0.703
TM_0282
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.699
TM_1624
Beta-mannosidase, putative; Similar to PID:1621036 percent identity: 53.79; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.697
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.