STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM_0301Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 59.88; identified by sequence similarity; putative. (334 aa)    
Predicted Functional Partners:
TM_0302
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 57.09; identified by sequence similarity; putative.
 
  0.956
TM_0300
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative; Similar to GB:AE000657 percent identity: 48.20; identified by sequence similarity; putative.
 
  0.929
TM_0303
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:U08186 PID:473270 GB:AE000512 percent identity: 76.00; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  0.897
TM_0073
Oligopeptide ABC transporter, permease protein; Similar to PID:1491736 percent identity: 56.57; identified by sequence similarity; putative.
 
  0.848
TM_0029
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 70.18; identified by sequence similarity; putative.
 
 
  0.847
TM_1197
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 62.46; identified by sequence similarity; putative.
 
  0.846
TM_1221
Oligopeptide ABC transporter, permease protein; Similar to GB:Pyro_h percent identity: 72.40; identified by sequence similarity; putative.
 
 
  0.841
TM_0071
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to PID:1143602 percent identity: 84.56; identified by sequence similarity; putative.
 
  0.833
TM_0304
Oligopeptide ABC transporter, ATP-binding protein; Similar to GB:Pyro_h percent identity: 65.51; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 0.832
TM_1199
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Similar to PID:1652862 percent identity: 53.42; identified by sequence similarity; putative.
  
  0.825
Your Current Organism:
Thermotoga maritima
NCBI taxonomy Id: 243274
Other names: T. maritima MSB8, Thermotoga maritima DSM 3109, Thermotoga maritima MSB8, Thermotoga maritima str. MSB8, Thermotoga maritima strain MSB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.